- Revision 1474: /ports/2.0/biology

• ..
• Makefile
• abyss/
• ad2vcf/
• artemis/
• avida/
• babel/
• bamtools/
• bcftools/
• bedtools/
• bioawk/
• biococoa/
• biolibc/
• bioparser/
• biosoup/
• bolt-lmm/
• bowtie/
• bowtie2/
• bwa/
• canu/
• cd-hit/
• cdbfasta/
• checkm/
• clustal-omega/
• clustalw/
• cufflinks/
• cytoscape/
• ddocent/
• diamond/
• dsr-pdb/
• edlib/
• emboss/
• exonerate/
• fasta/
• fasta3/
• fastahack/
• fastdnaml/
• fastool/
• fastp/
• fastqc/
• fasttree/
• fastx-toolkit/
• figtree/
• fluctuate/
• freebayes/
• garlic/
• gatk/
• gcta/
• gemma/
• generand/
• gff2ps/
• gmap/
• gperiodic/
• graphlan/
• grappa/
• groopm/
• haplohseq/
• hhsuite/
• hisat2/
• hmmer/
• htslib/
• hyphy/
• igv/
• infernal/
• iolib/
• iqtree/
• jalview/
• jellyfish/
• kallisto/
• lagan/
• lamarc/
• libbigwig/
• libgtextutils/
• libsbml/
• linux-foldingathome/
• mafft/
• mapm3/
• migrate/
• minimap2/
• molden/
• mopac/
• mothur/
• mrbayes/
• mummer/
• muscle/
• ncbi-blast+/
• ncbi-cxx-toolkit/
• ncbi-toolkit/
• ngs-sdk/
• p5-AcePerl/
• p5-Bio-ASN1-EntrezGene/
• p5-Bio-Cluster/
• p5-Bio-Coordinate/
• p5-Bio-DB-EMBL/
• p5-Bio-DB-NCBIHelper/
• p5-Bio-Das/
• p5-Bio-Das-Lite/
• p5-Bio-FeatureIO/
• p5-Bio-GFF3/
• p5-Bio-Glite/
• p5-Bio-Graphics/
• p5-Bio-MAGETAB/
• p5-Bio-NEXUS/
• p5-Bio-Phylo/
• p5-Bio-SCF/
• p5-Bio-Variation/
• p5-BioPerl/
• p5-BioPerl-Run/
• p5-TrimGalore/
• p5-transdecoder/
• paml/
• pbbam/
• pbseqan/
• pear-merger/
• phrap/
• phred/
• phylip/
• phyml/
• picard-tools/
• plink/
• pooler/
• primer3/
• prodigal/
• prodigy-lig/
• protomol/
• psi88/
• py-Genesis-PyAPI/
• py-biom-format/
• py-biopython/
• py-bx-python/
• py-cutadapt/
• py-dnaio/
• py-ete3/
• py-gffutils/
• py-gtfparse/
• py-hits/
• py-loompy/
• py-macs2/
• py-multiqc/
• py-orange3-bioinformatics/
• py-orange3-single-cell/
• py-pandas-charm/
• py-pyfaidx/
• py-pysam/
• py-scikit-bio/
• py-xenaPython/
• pyfasta/
• python-nexus/
• rainbow/
• rampler/
• recombine/
• ruby-bio/
• rubygem-bio/
• rubygem-bio-executables/
• rubygem-bio-old-biofetch-emulator/
• rubygem-bio-shell/
• samtools/
• scrm/
• seaview/
• seqan/
• seqan-apps/
• seqan1/
• seqio/
• seqtk/
• sim4/
• slclust/
• smithwaterman/
• spoa/
• stacks/
• star/
• stringtie/
• subread/
• tRNAscan-SE/
• tabixpp/
• treekin/
• treepuzzle/
• trimadap/
• trimmomatic/
• ugene/
• vcf-split/
• vcf2hap/
• vcflib/
• vcftools/
• velvet/
• viennarna/
• vsearch/
• vt/
• wise/