bin/blast_formatter
bin/blast_report
bin/blastdb_aliastool
bin/blastdb_convert
bin/blastdb_path
bin/blastdbcheck
bin/blastdbcmd
bin/blastdbcp
bin/blastn
bin/blastp
bin/blastx
bin/cleanup-blastdb-volumes.py
bin/convert2blastmask
bin/datatool
bin/deltablast
bin/dustmasker
bin/gc_cli
bin/gene_info_reader
bin/get_species_taxids.sh
bin/legacy_blast.pl
bin/lmdbxx_sample
bin/makeblastdb
bin/makembindex
bin/makeprofiledb
bin/project_tree_builder
bin/psiblast
bin/rpsblast
bin/rpstblastn
bin/run_with_lock
bin/seedtop
bin/segmasker
bin/seqdb_demo
bin/seqdb_perf
bin/tblastn
bin/tblastx
bin/update_blastdb.pl
bin/windowmasker
bin/windowmasker_2.2.22_adapter.py
include/ncbi-tools++/algo/blast/api/bl2seq.hpp
include/ncbi-tools++/algo/blast/api/blast_advprot_options.hpp
include/ncbi-tools++/algo/blast/api/blast_aux.hpp
include/ncbi-tools++/algo/blast/api/blast_dbindex.hpp
include/ncbi-tools++/algo/blast/api/blast_exception.hpp
include/ncbi-tools++/algo/blast/api/blast_mtlock.hpp
include/ncbi-tools++/algo/blast/api/blast_node.hpp
include/ncbi-tools++/algo/blast/api/blast_nucl_options.hpp
include/ncbi-tools++/algo/blast/api/blast_options.hpp
include/ncbi-tools++/algo/blast/api/blast_options_builder.hpp
include/ncbi-tools++/algo/blast/api/blast_options_handle.hpp
include/ncbi-tools++/algo/blast/api/blast_prot_options.hpp
include/ncbi-tools++/algo/blast/api/blast_results.hpp
include/ncbi-tools++/algo/blast/api/blast_rps_options.hpp
include/ncbi-tools++/algo/blast/api/blast_seqinfosrc.hpp
include/ncbi-tools++/algo/blast/api/blast_seqinfosrc_aux.hpp
include/ncbi-tools++/algo/blast/api/blast_types.hpp
include/ncbi-tools++/algo/blast/api/blast_usage_report.hpp
include/ncbi-tools++/algo/blast/api/blastp_kmer_options.hpp
include/ncbi-tools++/algo/blast/api/blastx_options.hpp
include/ncbi-tools++/algo/blast/api/cdd_pssm_input.hpp
include/ncbi-tools++/algo/blast/api/deltablast.hpp
include/ncbi-tools++/algo/blast/api/deltablast_options.hpp
include/ncbi-tools++/algo/blast/api/disc_nucl_options.hpp
include/ncbi-tools++/algo/blast/api/effsearchspace_calc.hpp
include/ncbi-tools++/algo/blast/api/hspstream_queue.hpp
include/ncbi-tools++/algo/blast/api/local_blast.hpp
include/ncbi-tools++/algo/blast/api/local_db_adapter.hpp
include/ncbi-tools++/algo/blast/api/local_search.hpp
include/ncbi-tools++/algo/blast/api/magicblast.hpp
include/ncbi-tools++/algo/blast/api/magicblast_options.hpp
include/ncbi-tools++/algo/blast/api/msa_pssm_input.hpp
include/ncbi-tools++/algo/blast/api/objmgr_query_data.hpp
include/ncbi-tools++/algo/blast/api/objmgrfree_query_data.hpp
include/ncbi-tools++/algo/blast/api/phiblast_nucl_options.hpp
include/ncbi-tools++/algo/blast/api/phiblast_prot_options.hpp
include/ncbi-tools++/algo/blast/api/prelim_stage.hpp
include/ncbi-tools++/algo/blast/api/psi_pssm_input.hpp
include/ncbi-tools++/algo/blast/api/psibl2seq.hpp
include/ncbi-tools++/algo/blast/api/psiblast.hpp
include/ncbi-tools++/algo/blast/api/psiblast_iteration.hpp
include/ncbi-tools++/algo/blast/api/psiblast_options.hpp
include/ncbi-tools++/algo/blast/api/pssm_engine.hpp
include/ncbi-tools++/algo/blast/api/pssm_input.hpp
include/ncbi-tools++/algo/blast/api/query_data.hpp
include/ncbi-tools++/algo/blast/api/remote_blast.hpp
include/ncbi-tools++/algo/blast/api/remote_search.hpp
include/ncbi-tools++/algo/blast/api/repeats_filter.hpp
include/ncbi-tools++/algo/blast/api/rps_aux.hpp
include/ncbi-tools++/algo/blast/api/rpsblast_local.hpp
include/ncbi-tools++/algo/blast/api/rpstblastn_options.hpp
include/ncbi-tools++/algo/blast/api/search_strategy.hpp
include/ncbi-tools++/algo/blast/api/seedtop.hpp
include/ncbi-tools++/algo/blast/api/seqinfosrc_seqdb.hpp
include/ncbi-tools++/algo/blast/api/seqinfosrc_seqvec.hpp
include/ncbi-tools++/algo/blast/api/seqsrc_multiseq.hpp
include/ncbi-tools++/algo/blast/api/seqsrc_seqdb.hpp
include/ncbi-tools++/algo/blast/api/setup_factory.hpp
include/ncbi-tools++/algo/blast/api/sseqloc.hpp
include/ncbi-tools++/algo/blast/api/subj_ranges_set.hpp
include/ncbi-tools++/algo/blast/api/tblastn_options.hpp
include/ncbi-tools++/algo/blast/api/tblastx_options.hpp
include/ncbi-tools++/algo/blast/api/traceback_stage.hpp
include/ncbi-tools++/algo/blast/api/uniform_search.hpp
include/ncbi-tools++/algo/blast/api/version.hpp
include/ncbi-tools++/algo/blast/api/windowmask_filter.hpp
include/ncbi-tools++/algo/blast/blastinput/blast_args.hpp
include/ncbi-tools++/algo/blast/blastinput/blast_asn1_input.hpp
include/ncbi-tools++/algo/blast/blastinput/blast_fasta_input.hpp
include/ncbi-tools++/algo/blast/blastinput/blast_input.hpp
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include/ncbi-tools++/algo/blast/blastinput/blastp_args.hpp
include/ncbi-tools++/algo/blast/blastinput/blastx_args.hpp
include/ncbi-tools++/algo/blast/blastinput/cmdline_flags.hpp
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include/ncbi-tools++/algo/blast/blastinput/igblastp_args.hpp
include/ncbi-tools++/algo/blast/blastinput/kblastp_args.hpp
include/ncbi-tools++/algo/blast/blastinput/magicblast_args.hpp
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include/ncbi-tools++/algo/blast/blastinput/rpsblast_args.hpp
include/ncbi-tools++/algo/blast/blastinput/rpstblastn_args.hpp
include/ncbi-tools++/algo/blast/blastinput/tblastn_args.hpp
include/ncbi-tools++/algo/blast/blastinput/tblastx_args.hpp
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include/ncbi-tools++/algo/blast/composition_adjustment/compo_mode_condition.h
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include/ncbi-tools++/algo/blast/core/hspfilter_mapper.h
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include/ncbi-tools++/algo/blast/core/spliced_hits.h
include/ncbi-tools++/algo/blast/core/split_query.h
include/ncbi-tools++/algo/blast/dbindex/dbindex.hpp
include/ncbi-tools++/algo/blast/dbindex/dbindex_sp.hpp
include/ncbi-tools++/algo/blast/dbindex/sequence_istream.hpp
include/ncbi-tools++/algo/blast/dbindex/sequence_istream_bdb.hpp
include/ncbi-tools++/algo/blast/dbindex/sequence_istream_fasta.hpp
include/ncbi-tools++/algo/blast/format/blast_async_format.hpp
include/ncbi-tools++/algo/blast/format/blast_format.hpp
include/ncbi-tools++/algo/blast/format/blastfmtutil.hpp
include/ncbi-tools++/algo/blast/format/blastxml2_format.hpp
include/ncbi-tools++/algo/blast/format/blastxml_format.hpp
include/ncbi-tools++/algo/blast/format/build_archive.hpp
include/ncbi-tools++/algo/blast/format/data4xml2format.hpp
include/ncbi-tools++/algo/blast/format/data4xmlformat.hpp
include/ncbi-tools++/algo/blast/format/sam.hpp
include/ncbi-tools++/algo/blast/format/vecscreen_run.hpp
include/ncbi-tools++/algo/blast/igblast/igblast.hpp
include/ncbi-tools++/algo/blast/proteinkmer/blastkmer.hpp
include/ncbi-tools++/algo/blast/proteinkmer/blastkmerindex.hpp
include/ncbi-tools++/algo/blast/proteinkmer/blastkmeroptions.hpp
include/ncbi-tools++/algo/blast/proteinkmer/blastkmerresults.hpp
include/ncbi-tools++/algo/blast/proteinkmer/blastkmerutils.hpp
include/ncbi-tools++/algo/blast/proteinkmer/kblastapi.hpp
include/ncbi-tools++/algo/blast/proteinkmer/mhfile.hpp
include/ncbi-tools++/algo/dustmask/sdust.tex
include/ncbi-tools++/algo/dustmask/symdust.hpp
include/ncbi-tools++/algo/segmask/segmask.hpp
include/ncbi-tools++/algo/winmask/README.API
include/ncbi-tools++/algo/winmask/seq_masker.hpp
include/ncbi-tools++/algo/winmask/seq_masker_cache_boost.hpp
include/ncbi-tools++/algo/winmask/seq_masker_istat.hpp
include/ncbi-tools++/algo/winmask/seq_masker_istat_ascii.hpp
include/ncbi-tools++/algo/winmask/seq_masker_istat_bin.hpp
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include/ncbi-tools++/algo/winmask/seq_masker_istat_oascii.hpp
include/ncbi-tools++/algo/winmask/seq_masker_istat_obinary.hpp
include/ncbi-tools++/algo/winmask/seq_masker_ostat.hpp
include/ncbi-tools++/algo/winmask/seq_masker_ostat_ascii.hpp
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include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt.hpp
include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt_ascii.hpp
include/ncbi-tools++/algo/winmask/seq_masker_ostat_opt_bin.hpp
include/ncbi-tools++/algo/winmask/seq_masker_score.hpp
include/ncbi-tools++/algo/winmask/seq_masker_score_mean.hpp
include/ncbi-tools++/algo/winmask/seq_masker_score_mean_glob.hpp
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include/ncbi-tools++/algo/winmask/seq_masker_window_pattern.hpp
include/ncbi-tools++/algo/winmask/seq_masker_window_pattern_ambig.hpp
include/ncbi-tools++/algo/winmask/win_mask_config.hpp
include/ncbi-tools++/algo/winmask/win_mask_counts_converter.hpp
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include/ncbi-tools++/algo/winmask/win_mask_util.hpp
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include/ncbi-tools++/cgi/impl/cgi_entry_reader.hpp
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include/ncbi-tools++/cgi/ncbicgir.hpp
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include/ncbi-tools++/common/boost_skew_guard.hpp
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include/ncbi-tools++/objtools/alnmgr/sparse_aln.hpp
include/ncbi-tools++/objtools/alnmgr/sparse_ci.hpp
include/ncbi-tools++/objtools/alnmgr/task_progress.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_dataextract.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_formatter.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/blastdb_seqid.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/invalid_data_exception.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/seq_formatter.hpp
include/ncbi-tools++/objtools/blast/blastdb_format/seq_writer.hpp
include/ncbi-tools++/objtools/blast/gene_info_reader/file_utils.hpp
include/ncbi-tools++/objtools/blast/gene_info_reader/gene_info.hpp
include/ncbi-tools++/objtools/blast/gene_info_reader/gene_info_reader.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/column_reader.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/lmdb++.h
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdb_lmdb.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbcol.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbfile.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbisam.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbtax.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/impl/seqdbvol.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/seqdb.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbblob.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbcommon.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/seqdbexpert.hpp
include/ncbi-tools++/objtools/blast/seqdb_reader/seqidlist_reader.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/build_db.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/impl/criteria.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/multisource_util.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/seqidlist_writer.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/taxid_set.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_convert.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_error.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_files.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_general.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_isam.hpp
include/ncbi-tools++/objtools/blast/seqdb_writer/writedb_lmdb.hpp
include/ncbi-tools++/objtools/blast/services/blast_services.hpp
include/ncbi-tools++/objtools/cleanup/autogenerated_cleanup.hpp
include/ncbi-tools++/objtools/cleanup/capitalization_string.hpp
include/ncbi-tools++/objtools/cleanup/cleanup.hpp
include/ncbi-tools++/objtools/cleanup/cleanup_change.hpp
include/ncbi-tools++/objtools/cleanup/cleanup_message.hpp
include/ncbi-tools++/objtools/cleanup/cleanup_pub.hpp
include/ncbi-tools++/objtools/cleanup/fix_feature_id.hpp
include/ncbi-tools++/objtools/data_loaders/blastdb/bdbloader.hpp
include/ncbi-tools++/objtools/data_loaders/blastdb/bdbloader_rmt.hpp
include/ncbi-tools++/objtools/data_loaders/blastdb/blastdb_adapter.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/blob_id.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache_entry.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/cache/reader_cache_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/cache/writer_cache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/cache/writer_cache_entry.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/gbloader.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/gbloader_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/gbnative.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache_entry.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/gicache/reader_gicache_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1_entry.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/id1/reader_id1_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2_entry.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/id2/reader_id2_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/impl/cache_manager.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/dispatcher.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/gbload_util.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/incr_time.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/info_cache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/processor.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/processors.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/psg_loader_impl.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_id1_base.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_id2_base.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/reader_service.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/request_result.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/standalone_result.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/impl/statistics.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/psg_loader.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/reader.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/reader_interface.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/reader_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/reader_service_params.h
include/ncbi-tools++/objtools/data_loaders/genbank/reader_snp.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/cache/reader_cache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/cache/writer_cache.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/id1/reader_id1.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/id2/reader_id2.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/pubseqos/reader_pubseq.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/readers/pubseqos2/reader_pubseq2.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/seqref.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/writer.hpp
include/ncbi-tools++/objtools/data_loaders/genbank/writer_interface.hpp
include/ncbi-tools++/objtools/data_loaders/loaders.hpp
include/ncbi-tools++/objtools/edit/apply_object.hpp
include/ncbi-tools++/objtools/edit/autodef.hpp
include/ncbi-tools++/objtools/edit/autodef_options.hpp
include/ncbi-tools++/objtools/edit/autodef_source_desc.hpp
include/ncbi-tools++/objtools/edit/autodef_with_tax.hpp
include/ncbi-tools++/objtools/edit/capitalization_string.hpp
include/ncbi-tools++/objtools/edit/cds_fix.hpp
include/ncbi-tools++/objtools/edit/dblink_field.hpp
include/ncbi-tools++/objtools/edit/edit_error.hpp
include/ncbi-tools++/objtools/edit/edit_exception.hpp
include/ncbi-tools++/objtools/edit/external_annots.hpp
include/ncbi-tools++/objtools/edit/feattable_edit.hpp
include/ncbi-tools++/objtools/edit/feature_propagate.hpp
include/ncbi-tools++/objtools/edit/field_handler.hpp
include/ncbi-tools++/objtools/edit/gap_trim.hpp
include/ncbi-tools++/objtools/edit/gaps_edit.hpp
include/ncbi-tools++/objtools/edit/gb_block_field.hpp
include/ncbi-tools++/objtools/edit/gene_utils.hpp
include/ncbi-tools++/objtools/edit/link_cds_mrna.hpp
include/ncbi-tools++/objtools/edit/loc_edit.hpp
include/ncbi-tools++/objtools/edit/mail_report.hpp
include/ncbi-tools++/objtools/edit/parse_text_options.hpp
include/ncbi-tools++/objtools/edit/promote.hpp
include/ncbi-tools++/objtools/edit/publication_edit.hpp
include/ncbi-tools++/objtools/edit/remote_updater.hpp
include/ncbi-tools++/objtools/edit/rna_edit.hpp
include/ncbi-tools++/objtools/edit/seq_edit.hpp
include/ncbi-tools++/objtools/edit/seq_entry_edit.hpp
include/ncbi-tools++/objtools/edit/seqid_guesser.hpp
include/ncbi-tools++/objtools/edit/source_edit.hpp
include/ncbi-tools++/objtools/edit/string_constraint.hpp
include/ncbi-tools++/objtools/edit/struc_comm_field.hpp
include/ncbi-tools++/objtools/edit/text_desc_field.hpp
include/ncbi-tools++/objtools/edit/text_object_description.hpp
include/ncbi-tools++/objtools/error_codes.hpp
include/ncbi-tools++/objtools/format/cigar_formatter.hpp
include/ncbi-tools++/objtools/format/context.hpp
include/ncbi-tools++/objtools/format/embl_formatter.hpp
include/ncbi-tools++/objtools/format/embl_gather.hpp
include/ncbi-tools++/objtools/format/feature_gather.hpp
include/ncbi-tools++/objtools/format/flat_expt.hpp
include/ncbi-tools++/objtools/format/flat_file_config.hpp
include/ncbi-tools++/objtools/format/flat_file_generator.hpp
include/ncbi-tools++/objtools/format/format_item_ostream.hpp
include/ncbi-tools++/objtools/format/formatter.hpp
include/ncbi-tools++/objtools/format/ftable_formatter.hpp
include/ncbi-tools++/objtools/format/ftable_gather.hpp
include/ncbi-tools++/objtools/format/gather_items.hpp
include/ncbi-tools++/objtools/format/gather_iter.hpp
include/ncbi-tools++/objtools/format/gbseq_formatter.hpp
include/ncbi-tools++/objtools/format/genbank_formatter.hpp
include/ncbi-tools++/objtools/format/genbank_gather.hpp
include/ncbi-tools++/objtools/format/item_formatter.hpp
include/ncbi-tools++/objtools/format/item_ostream.hpp
include/ncbi-tools++/objtools/format/items/accession_item.hpp
include/ncbi-tools++/objtools/format/items/alignment_item.hpp
include/ncbi-tools++/objtools/format/items/basecount_item.hpp
include/ncbi-tools++/objtools/format/items/comment_item.hpp
include/ncbi-tools++/objtools/format/items/contig_item.hpp
include/ncbi-tools++/objtools/format/items/ctrl_items.hpp
include/ncbi-tools++/objtools/format/items/date_item.hpp
include/ncbi-tools++/objtools/format/items/dbsource_item.hpp
include/ncbi-tools++/objtools/format/items/defline_item.hpp
include/ncbi-tools++/objtools/format/items/feature_item.hpp
include/ncbi-tools++/objtools/format/items/flat_qual_slots.hpp
include/ncbi-tools++/objtools/format/items/flat_seqloc.hpp
include/ncbi-tools++/objtools/format/items/gap_item.hpp
include/ncbi-tools++/objtools/format/items/gene_finder.hpp
include/ncbi-tools++/objtools/format/items/genome_item.hpp
include/ncbi-tools++/objtools/format/items/genome_project_item.hpp
include/ncbi-tools++/objtools/format/items/html_anchor_item.hpp
include/ncbi-tools++/objtools/format/items/item.hpp
include/ncbi-tools++/objtools/format/items/item_base.hpp
include/ncbi-tools++/objtools/format/items/keywords_item.hpp
include/ncbi-tools++/objtools/format/items/locus_item.hpp
include/ncbi-tools++/objtools/format/items/origin_item.hpp
include/ncbi-tools++/objtools/format/items/primary_item.hpp
include/ncbi-tools++/objtools/format/items/qualifiers.hpp
include/ncbi-tools++/objtools/format/items/reference_item.hpp
include/ncbi-tools++/objtools/format/items/segment_item.hpp
include/ncbi-tools++/objtools/format/items/sequence_item.hpp
include/ncbi-tools++/objtools/format/items/source_item.hpp
include/ncbi-tools++/objtools/format/items/tsa_item.hpp
include/ncbi-tools++/objtools/format/items/version_item.hpp
include/ncbi-tools++/objtools/format/items/wgs_item.hpp
include/ncbi-tools++/objtools/format/ostream_text_ostream.hpp
include/ncbi-tools++/objtools/format/sam_formatter.hpp
include/ncbi-tools++/objtools/format/text_ostream.hpp
include/ncbi-tools++/objtools/logging/listener.hpp
include/ncbi-tools++/objtools/logging/message.hpp
include/ncbi-tools++/objtools/pubseq_gateway/client/impl/misc.hpp
include/ncbi-tools++/objtools/pubseq_gateway/client/psg_client.hpp
include/ncbi-tools++/objtools/readers/agp_converter.hpp
include/ncbi-tools++/objtools/readers/agp_read.hpp
include/ncbi-tools++/objtools/readers/agp_seq_entry.hpp
include/ncbi-tools++/objtools/readers/agp_util.hpp
include/ncbi-tools++/objtools/readers/agp_validate_reader.hpp
include/ncbi-tools++/objtools/readers/aln_error_reporter.hpp
include/ncbi-tools++/objtools/readers/aln_formats.hpp
include/ncbi-tools++/objtools/readers/aln_reader.hpp
include/ncbi-tools++/objtools/readers/alnread.hpp
include/ncbi-tools++/objtools/readers/bed_reader.hpp
include/ncbi-tools++/objtools/readers/cigar.hpp
include/ncbi-tools++/objtools/readers/error_container.hpp
include/ncbi-tools++/objtools/readers/fasta.hpp
include/ncbi-tools++/objtools/readers/fasta_exception.hpp
include/ncbi-tools++/objtools/readers/fasta_reader_utils.hpp
include/ncbi-tools++/objtools/readers/featuredump.hpp
include/ncbi-tools++/objtools/readers/format_guess_ex.hpp
include/ncbi-tools++/objtools/readers/getfeature.hpp
include/ncbi-tools++/objtools/readers/gff2_data.hpp
include/ncbi-tools++/objtools/readers/gff2_reader.hpp
include/ncbi-tools++/objtools/readers/gff3_reader.hpp
include/ncbi-tools++/objtools/readers/gff3_sofa.hpp
include/ncbi-tools++/objtools/readers/gff_base_columns.hpp
include/ncbi-tools++/objtools/readers/gff_reader.hpp
include/ncbi-tools++/objtools/readers/glimmer_reader.hpp
include/ncbi-tools++/objtools/readers/gtf_reader.hpp
include/ncbi-tools++/objtools/readers/gvf_reader.hpp
include/ncbi-tools++/objtools/readers/idmapper.hpp
include/ncbi-tools++/objtools/readers/iidmapper.hpp
include/ncbi-tools++/objtools/readers/line_error.hpp
include/ncbi-tools++/objtools/readers/message_listener.hpp
include/ncbi-tools++/objtools/readers/microarray_reader.hpp
include/ncbi-tools++/objtools/readers/mod_error.hpp
include/ncbi-tools++/objtools/readers/mod_reader.hpp
include/ncbi-tools++/objtools/readers/phrap.hpp
include/ncbi-tools++/objtools/readers/psl_reader.hpp
include/ncbi-tools++/objtools/readers/read_util.hpp
include/ncbi-tools++/objtools/readers/reader_base.hpp
include/ncbi-tools++/objtools/readers/reader_error_codes.hpp
include/ncbi-tools++/objtools/readers/reader_exception.hpp
include/ncbi-tools++/objtools/readers/reader_idgen.hpp
include/ncbi-tools++/objtools/readers/reader_listener.hpp
include/ncbi-tools++/objtools/readers/reader_message.hpp
include/ncbi-tools++/objtools/readers/readfeat.hpp
include/ncbi-tools++/objtools/readers/rm_reader.hpp
include/ncbi-tools++/objtools/readers/seqid_validate.hpp
include/ncbi-tools++/objtools/readers/source_mod_parser.hpp
include/ncbi-tools++/objtools/readers/source_mod_parser_wrapper.hpp
include/ncbi-tools++/objtools/readers/struct_cmt_reader.hpp
include/ncbi-tools++/objtools/readers/table_filter.hpp
include/ncbi-tools++/objtools/readers/track_data.hpp
include/ncbi-tools++/objtools/readers/ucscregion_reader.hpp
include/ncbi-tools++/objtools/readers/vcf_reader.hpp
include/ncbi-tools++/objtools/readers/wiggle_reader.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_bdb_reader.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_cmdline_args.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_fasta_reader.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_reader.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer_fasta.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer_int.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer_seqloc.hpp
include/ncbi-tools++/objtools/seqmasks_io/mask_writer_tab.hpp
include/ncbi-tools++/objtools/simple/simple_om.hpp
include/ncbi-tools++/serial/delaybuf.hpp
include/ncbi-tools++/serial/enumvalues.hpp
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include/ncbi-tools++/serial/exception.hpp
include/ncbi-tools++/serial/grpc_integration/grpc_integration.hpp
include/ncbi-tools++/serial/grpc_integration/impl/grpc_support.hpp
include/ncbi-tools++/serial/impl/aliasinfo.hpp
include/ncbi-tools++/serial/impl/asntypes.hpp
include/ncbi-tools++/serial/impl/autoptrinfo.hpp
include/ncbi-tools++/serial/impl/choice.hpp
include/ncbi-tools++/serial/impl/choice.inl
include/ncbi-tools++/serial/impl/choiceptr.hpp
include/ncbi-tools++/serial/impl/classinfo.hpp
include/ncbi-tools++/serial/impl/classinfo.inl
include/ncbi-tools++/serial/impl/classinfob.hpp
include/ncbi-tools++/serial/impl/classinfob.inl
include/ncbi-tools++/serial/impl/classinfohelper.hpp
include/ncbi-tools++/serial/impl/continfo.hpp
include/ncbi-tools++/serial/impl/continfo.inl
include/ncbi-tools++/serial/impl/enumerated.hpp
include/ncbi-tools++/serial/impl/hookdata.hpp
include/ncbi-tools++/serial/impl/hookdatakey.hpp
include/ncbi-tools++/serial/impl/hookfunc.hpp
include/ncbi-tools++/serial/impl/item.hpp
include/ncbi-tools++/serial/impl/item.inl
include/ncbi-tools++/serial/impl/member.hpp
include/ncbi-tools++/serial/impl/member.inl
include/ncbi-tools++/serial/impl/memberid.hpp
include/ncbi-tools++/serial/impl/memberid.inl
include/ncbi-tools++/serial/impl/memberlist.hpp
include/ncbi-tools++/serial/impl/memberlist.inl
include/ncbi-tools++/serial/impl/objcopy.inl
include/ncbi-tools++/serial/impl/objectinfo.inl
include/ncbi-tools++/serial/impl/objectio.inl
include/ncbi-tools++/serial/impl/objectiter.inl
include/ncbi-tools++/serial/impl/objecttype.hpp
include/ncbi-tools++/serial/impl/objistr.inl
include/ncbi-tools++/serial/impl/objistrasnb.inl
include/ncbi-tools++/serial/impl/objistrimpl.hpp
include/ncbi-tools++/serial/impl/objistrxml.inl
include/ncbi-tools++/serial/impl/objlist.hpp
include/ncbi-tools++/serial/impl/objlist.inl
include/ncbi-tools++/serial/impl/objostr.inl
include/ncbi-tools++/serial/impl/objostrxml.inl
include/ncbi-tools++/serial/impl/objstack.hpp
include/ncbi-tools++/serial/impl/objstack.inl
include/ncbi-tools++/serial/impl/objstrasnb.hpp
include/ncbi-tools++/serial/impl/objstrasnb.inl
include/ncbi-tools++/serial/impl/pathhook.hpp
include/ncbi-tools++/serial/impl/ptrinfo.hpp
include/ncbi-tools++/serial/impl/ptrinfo.inl
include/ncbi-tools++/serial/impl/serialasndef.hpp
include/ncbi-tools++/serial/impl/stdtypeinfo.hpp
include/ncbi-tools++/serial/impl/stdtypes.hpp
include/ncbi-tools++/serial/impl/stdtypes.inl
include/ncbi-tools++/serial/impl/stdtypesimpl.hpp
include/ncbi-tools++/serial/impl/stltypes.hpp
include/ncbi-tools++/serial/impl/stltypesimpl.hpp
include/ncbi-tools++/serial/impl/timetypeinfo.hpp
include/ncbi-tools++/serial/impl/typeinfo.inl
include/ncbi-tools++/serial/impl/typeinfoimpl.hpp
include/ncbi-tools++/serial/impl/typemap.hpp
include/ncbi-tools++/serial/impl/typemapimpl.hpp
include/ncbi-tools++/serial/impl/typeref.hpp
include/ncbi-tools++/serial/impl/typeref.inl
include/ncbi-tools++/serial/impl/variant.hpp
include/ncbi-tools++/serial/impl/variant.inl
include/ncbi-tools++/serial/iterator.hpp
include/ncbi-tools++/serial/objcopy.hpp
include/ncbi-tools++/serial/objectinfo.hpp
include/ncbi-tools++/serial/objectio.hpp
include/ncbi-tools++/serial/objectiter.hpp
include/ncbi-tools++/serial/objhook.hpp
include/ncbi-tools++/serial/objistr.hpp
include/ncbi-tools++/serial/objistrasn.hpp
include/ncbi-tools++/serial/objistrasnb.hpp
include/ncbi-tools++/serial/objistrjson.hpp
include/ncbi-tools++/serial/objistrxml.hpp
include/ncbi-tools++/serial/objostr.hpp
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include/ncbi-tools++/serial/objostrjson.hpp
include/ncbi-tools++/serial/objostrxml.hpp
include/ncbi-tools++/serial/pack_string.hpp
include/ncbi-tools++/serial/rpcbase.hpp
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include/ncbi-tools++/serial/serial.hpp
include/ncbi-tools++/serial/serialasn.hpp
include/ncbi-tools++/serial/serialbase.hpp
include/ncbi-tools++/serial/serialdef.hpp
include/ncbi-tools++/serial/serialimpl.hpp
include/ncbi-tools++/serial/serializable.hpp
include/ncbi-tools++/serial/serialutil.hpp
include/ncbi-tools++/serial/streamiter.hpp
include/ncbi-tools++/serial/typeinfo.hpp
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include/ncbi-tools++/util/align_range_oper.hpp
include/ncbi-tools++/util/arg_regexp.hpp
include/ncbi-tools++/util/ascii85.hpp
include/ncbi-tools++/util/bitset/bitset_debug.hpp
include/ncbi-tools++/util/bitset/bitset_pool.hpp
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include/ncbi-tools++/util/bitset/bmaggregator.h
include/ncbi-tools++/util/bitset/bmalgo.h
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include/ncbi-tools++/util/bitset/bmalgo_similarity.h
include/ncbi-tools++/util/bitset/bmalloc.h
include/ncbi-tools++/util/bitset/bmavx2.h
include/ncbi-tools++/util/bitset/bmavx512.h
include/ncbi-tools++/util/bitset/bmblocks.h
include/ncbi-tools++/util/bitset/bmbmatrix.h
include/ncbi-tools++/util/bitset/bmbmi1.h
include/ncbi-tools++/util/bitset/bmbmi2.h
include/ncbi-tools++/util/bitset/bmbuffer.h
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include/ncbi-tools++/util/bitset/bmfwd.h
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include/ncbi-tools++/util/bitset/bmintervals.h
include/ncbi-tools++/util/bitset/bmrandom.h
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