============================================================================= The EMBOSS suite has been successfully installed under %%PREFIX%% To run EMBOSS programs make sure that %%PREFIX%%/bin is in your PATH. In order to see graphical output from some EMBOSS programs, you will need to set the following environment variable in your shell: set PLPLOT_LIB to: "%%PREFIX%%/share/EMBOSS" A sample configuration file has been installed in %%DATADIR%%/emboss.default.template This must be renamed to emboss.default and edited to suit your site and requirements. A .embossrc file in a user's home directory overrides settings in the system-wide emboss.default. Additional third party applications for EMBOSS can be installed from the biology/embassy port. Remember, though that if you installed EMBOSS in a PREFIX other than the default, you will have to install EMBASSY into this same PREFIX. =============================================================================