--- Makefile.orig 2013-03-17 11:38:57.213776000 +0000 +++ Makefile @@ -13,7 +13,7 @@ RFLAGS = -DRELEASE=$(COV_RELEASE) -D ## greatly speeding scans of unfinished sequence ## where Perl v.5 (or greater) is installed -PERLDIR = /usr/bin +PERLDIR = $(PREFIX)/bin ## what you call the Perl v.5 executable on your system ## (this could be 'perl5' or otherwise on some systems)